Discussion:
[R-sig-phylo] Will phyloXML in R be useful?
George Vega Yon
2017-12-13 00:13:09 UTC
Permalink
Hey,

Right now, I'm working on a wrapper for jsPhyloSVG (a javascript library
for visualizing phylogenetic trees on the web browser) in R, and just got
to learn about the phyloXML format. Googling around and checking out this
email list archives it seems that there's no support for this format in R.

My question is: how useful do you think having this in R will be? I'm
willing to write an R package to read/write trees in this format (done
before with GEXF, which is for networks in general). But I just want to
make sure that (1) this will be useful for the community, and (2) I'm not
reinventing the wheel (is anybody working on this now?). What are your
thoughts?

Best,

George G. Vega Yon
+1 (626) 381 8171
http://ggvy.cl

[[alternative HTML version deleted]]

_______________________________________________
R-sig-phylo mailing list - R-sig-***@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-phylo
Searchable archive at http://www.mail-archive.com/r-sig-***@r-project.org/
Daniel Fulop
2017-12-13 00:31:25 UTC
Permalink
Sounds like a good idea. Not sure if you’re reinventing the wheel or not.
Sounds like something ROpenSci might support; see:
https://github.com/ropensci/onboarding




From: George Vega Yon <***@gmail.com> <***@gmail.com>
Reply: George Vega Yon <***@gmail.com> <***@gmail.com>
Date: December 12, 2017 at 4:13:59 PM
To: Group R-sig-phylo <r-sig-***@r-project.org>
<r-sig-***@r-project.org>
Subject: [R-sig-phylo] Will phyloXML in R be useful?

Hey,

Right now, I'm working on a wrapper for jsPhyloSVG (a javascript library
for visualizing phylogenetic trees on the web browser) in R, and just got
to learn about the phyloXML format. Googling around and checking out this
email list archives it seems that there's no support for this format in R.

My question is: how useful do you think having this in R will be? I'm
willing to write an R package to read/write trees in this format (done
before with GEXF, which is for networks in general). But I just want to
make sure that (1) this will be useful for the community, and (2) I'm not
reinventing the wheel (is anybody working on this now?). What are your
thoughts?

Best,

George G. Vega Yon
+1 (626) 381 8171
http://ggvy.cl

[[alternative HTML version deleted]]

_______________________________________________
R-sig-phylo mailing list - R-sig-***@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-phylo
Searchable archive at http://www.mail-archive.com/r-sig-***@r-project.org/

[[alternative HTML version deleted]]

_______________________________________________
R-sig-phylo mailing list - R-sig-***@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-phylo
Searchable archive at http://www.mail-archive.c
George Vega Yon
2017-12-13 19:35:25 UTC
Permalink
That's a good suggestion. I'll reach out the rOpenSci people/

Still, I'm starting a repo here: https://github.com/USCBiostats/rphyloxml
will start dropping stuff there.

Best,

George G. Vega Yon
+1 (626) 381 8171
http://ggvy.cl
Post by Daniel Fulop
Sounds like a good idea. Not sure if you’re reinventing the wheel or not.
https://github.com/ropensci/onboarding
Date: December 12, 2017 at 4:13:59 PM
Subject: [R-sig-phylo] Will phyloXML in R be useful?
Hey,
Right now, I'm working on a wrapper for jsPhyloSVG (a javascript library
for visualizing phylogenetic trees on the web browser) in R, and just got
to learn about the phyloXML format. Googling around and checking out this
email list archives it seems that there's no support for this format in R.
My question is: how useful do you think having this in R will be? I'm
willing to write an R package to read/write trees in this format (done
before with GEXF, which is for networks in general). But I just want to
make sure that (1) this will be useful for the community, and (2) I'm not
reinventing the wheel (is anybody working on this now?). What are your
thoughts?
Best,
George G. Vega Yon
+1 (626) 381 8171 <(626)%20381-8171>
http://ggvy.cl
[[alternative HTML version deleted]]
_______________________________________________
https://stat.ethz.ch/mailman/listinfo/r-sig-phylo
Searchable archive at http://www.mail-archive.com/r-
[[alternative HTML version deleted]]

_______________________________________________
R-sig-phylo mailing list - R-sig-***@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-phylo
Searchable archive at http://www.mail-arch
George Vega Yon
2017-12-14 20:41:03 UTC
Permalink
Hey,

Just for the record. I just found two alternatives that seem to be in
active development, nexml (www.nexml.org) and RecPhyloXML (
http://phylariane.univ-lyon1.fr/recphyloxml/). nexml is supported by
rOpenSci (https://github.com/ropensci/RNeXML), and both have C++/phython
APIs that can be useful for R package development.

I still may try to get something done on PhyloXML since jsPhyloSVG, which
I'm working on now https://uscbiostats.github.io/jsPhyloSVG/, only supports
annotations in PhyloXML (it does support nexml trees, but I don't think it
support annotations).

Best,

George G. Vega Yon
+1 (626) 381 8171 <(626)%20381-8171>
http://ggvy.cl
Post by George Vega Yon
That's a good suggestion. I'll reach out the rOpenSci people/
Still, I'm starting a repo here: https://github.com/USCBiostats/rphyloxml
will start dropping stuff there.
Best,
George G. Vega Yon
+1 (626) 381 8171 <(626)%20381-8171>
http://ggvy.cl
Post by Daniel Fulop
Sounds like a good idea. Not sure if you’re reinventing the wheel or not.
https://github.com/ropensci/onboarding
Date: December 12, 2017 at 4:13:59 PM
Subject: [R-sig-phylo] Will phyloXML in R be useful?
Hey,
Right now, I'm working on a wrapper for jsPhyloSVG (a javascript library
for visualizing phylogenetic trees on the web browser) in R, and just got
to learn about the phyloXML format. Googling around and checking out this
email list archives it seems that there's no support for this format in R.
My question is: how useful do you think having this in R will be? I'm
willing to write an R package to read/write trees in this format (done
before with GEXF, which is for networks in general). But I just want to
make sure that (1) this will be useful for the community, and (2) I'm not
reinventing the wheel (is anybody working on this now?). What are your
thoughts?
Best,
George G. Vega Yon
+1 (626) 381 8171 <(626)%20381-8171>
http://ggvy.cl
[[alternative HTML version deleted]]
_______________________________________________
https://stat.ethz.ch/mailman/listinfo/r-sig-phylo
Searchable archive at http://www.mail-archive.com/r-
[[alternative HTML version deleted]]

_______________________________________________
R-sig-phylo mailing list - R-sig-***@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-phylo
Searchable archive at http://www.mail-archive.com/r-sig-***@r-projec
Hilmar Lapp
2017-12-15 00:22:24 UTC
Permalink
Hi George,

Yes, there’s RNeXML. Glad you found it on your own, I’ve been occupied with a workshop. Note that there’s a publication on RNeXML too, as you’ve probably seen in the README on Github.

Personally, I think it’d be great to have phyloXML support as well in the R ecosystem. However, I’d argue that while the two exchange standards have different strengths (and NeXML is not without its own “warts”), for the benefit of the user (typically a biology scientist-developer) it would seem to be vastly preferable if these standards converge at the R API level. So maybe phyloXML support could be added on to RNeXML, or if its own package, at least the R API signature could be kept in synchrony?

-hilmar
Post by George Vega Yon
Hey,
Just for the record. I just found two alternatives that seem to be in
active development, nexml (www.nexml.org) and RecPhyloXML (
https://urldefense.proofpoint.com/v2/url?u=http-3A__phylariane.univ-2Dlyon1.fr_recphyloxml_&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=5CdlhUFqJAcw9qGduCmWrGXPwhWFUhZMcOss0uysZ34&e= ). nexml is supported by
rOpenSci (https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_ropensci_RNeXML&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=E2KdcumsPG-JacTs6EbDx9PNds1g15J0lpbZVFgcnLs&e= ), and both have C++/phython
APIs that can be useful for R package development.
I still may try to get something done on PhyloXML since jsPhyloSVG, which
I'm working on now https://urldefense.proofpoint.com/v2/url?u=https-3A__uscbiostats.github.io_jsPhyloSVG_&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=qCOKU5kc59kVmuDmY13hm0h_F0-5VtB-8YC5dp3Nc_I&e= , only supports
annotations in PhyloXML (it does support nexml trees, but I don't think it
support annotations).
Best,
George G. Vega Yon
+1 (626) 381 8171 <(626)%20381-8171>
https://urldefense.proofpoint.com/v2/url?u=http-3A__ggvy.cl&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=GH2YmJwH3j59FpvbwH0pJu3-LJHbo4BTkG73yMtknFw&e=
Post by George Vega Yon
That's a good suggestion. I'll reach out the rOpenSci people/
Still, I'm starting a repo here: https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_USCBiostats_rphyloxml&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=ZI73M-7QB4r4wS6k6y4ZjA4nQsF0MMbpxv-IATJ8VuI&e=
will start dropping stuff there.
Best,
George G. Vega Yon
+1 (626) 381 8171 <(626)%20381-8171>
https://urldefense.proofpoint.com/v2/url?u=http-3A__ggvy.cl&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=GH2YmJwH3j59FpvbwH0pJu3-LJHbo4BTkG73yMtknFw&e=
Post by Daniel Fulop
Sounds like a good idea. Not sure if you’re reinventing the wheel or not.
https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_ropensci_onboarding&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=Xaz1EafJxnCZMDhwVbMq39-DSlGClnlW10wmp8307EA&e=
Date: December 12, 2017 at 4:13:59 PM
Subject: [R-sig-phylo] Will phyloXML in R be useful?
Hey,
Right now, I'm working on a wrapper for jsPhyloSVG (a javascript library
for visualizing phylogenetic trees on the web browser) in R, and just got
to learn about the phyloXML format. Googling around and checking out this
email list archives it seems that there's no support for this format in R.
My question is: how useful do you think having this in R will be? I'm
willing to write an R package to read/write trees in this format (done
before with GEXF, which is for networks in general). But I just want to
make sure that (1) this will be useful for the community, and (2) I'm not
reinventing the wheel (is anybody working on this now?). What are your
thoughts?
Best,
George G. Vega Yon
+1 (626) 381 8171 <(626)%20381-8171>
https://urldefense.proofpoint.com/v2/url?u=http-3A__ggvy.cl&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=GH2YmJwH3j59FpvbwH0pJu3-LJHbo4BTkG73yMtknFw&e=
[[alternative HTML version deleted]]
_______________________________________________
https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_r-2Dsig-2Dphylo&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=F6nfY69ENJtHqcPhA_so8xyQlwQpn3HwI63r5ov4Xf8&e=
Searchable archive at https://urldefense.proofpoint.com/v2/url?u=http-3A__www.mail-2Darchive.com_r-2D&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=ysaFlE8Zm70teQET_RVPd9xB5EvNFPojxC-Pt7Ekpuk&e=
[[alternative HTML version deleted]]
_______________________________________________
https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_r-2Dsig-2Dphylo&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=F6nfY69ENJtHqcPhA_so8xyQlwQpn3HwI63r5ov4Xf8&e=
Searchable archive at https://urldefense.proofpoint.com/v2/url?u=http-3A__www.mail-2Darchive.com_r-2Dsig-2Dphylo-40r-2Dproject.org_&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=JBS4-wowjXN2N2zGbTKrOkxo5314bZIjY40wPxcc9cY&e=
--
Hilmar Lapp -:- genome.duke.edu -:- lappland.io

_______________________________________________
R-sig-phylo mailing list - R-sig-***@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-phylo
Searchable archive at
George Vega Yon
2017-12-15 00:32:42 UTC
Permalink
Hi Hilmar,

That sounds good. I've actually managed to build rphyloxml very quickly for
creating phyloXML files from phylo (ape) objects.
https://uscbiostats.github.io/rphyloxml/

Perhaps we should continue this discussion outside of the list to see how
can we integrate both packages (no need to have rphyloxml as a package
aside, happy to join RNeXML :))

Best,

George G. Vega Yon
+1 (626) 381 8171
http://ggvy.cl
Post by Hilmar Lapp
Hi George,
Yes, there’s RNeXML. Glad you found it on your own, I’ve been occupied
with a workshop. Note that there’s a publication on RNeXML too, as you’ve
probably seen in the README on Github.
Personally, I think it’d be great to have phyloXML support as well in the
R ecosystem. However, I’d argue that while the two exchange standards have
different strengths (and NeXML is not without its own “warts”), for the
benefit of the user (typically a biology scientist-developer) it would seem
to be vastly preferable if these standards converge at the R API level. So
maybe phyloXML support could be added on to RNeXML, or if its own package,
at least the R API signature could be kept in synchrony?
-hilmar
Post by George Vega Yon
Hey,
Just for the record. I just found two alternatives that seem to be in
active development, nexml (www.nexml.org) and RecPhyloXML (
https://urldefense.proofpoint.com/v2/url?u=http-3A__
phylariane.univ-2Dlyon1.fr_recphyloxml_&d=DwIGaQ&c=
imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_
7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-
6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=5CdlhUFqJAcw9qGduCmWrGXPwhWFUh
ZMcOss0uysZ34&e= ). nexml is supported by
Post by George Vega Yon
rOpenSci (https://urldefense.proofpoint.com/v2/url?u=https-
3A__github.com_ropensci_RNeXML&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6Y
HLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_
Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=E2KdcumsPG-
JacTs6EbDx9PNds1g15J0lpbZVFgcnLs&e= ), and both have C++/phython
Post by George Vega Yon
APIs that can be useful for R package development.
I still may try to get something done on PhyloXML since jsPhyloSVG, which
I'm working on now https://urldefense.proofpoint.com/v2/url?u=https-3A__
uscbiostats.github.io_jsPhyloSVG_&d=DwIGaQ&c=
imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_
7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-
6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=qCOKU5kc59kVmuDmY13hm0h_F0-
5VtB-8YC5dp3Nc_I&e= , only supports
Post by George Vega Yon
annotations in PhyloXML (it does support nexml trees, but I don't think
it
Post by George Vega Yon
support annotations).
Best,
George G. Vega Yon
+1 (626) 381 8171 <(626)%20381-8171>
https://urldefense.proofpoint.com/v2/url?u=http-3A__ggvy.cl&d=DwIGaQ&c=
imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_
7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-
6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=GH2YmJwH3j59FpvbwH0pJu3-
LJHbo4BTkG73yMtknFw&e=
Post by George Vega Yon
Post by George Vega Yon
That's a good suggestion. I'll reach out the rOpenSci people/
Still, I'm starting a repo here: https://urldefense.proofpoint.
com/v2/url?u=https-3A__github.com_USCBiostats_rphyloxml&d=DwIGaQ&c=
imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_
7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-
6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=ZI73M-7QB4r4wS6k6y4ZjA4nQsF0MMbpxv-
IATJ8VuI&e=
Post by George Vega Yon
Post by George Vega Yon
will start dropping stuff there.
Best,
George G. Vega Yon
+1 (626) 381 8171 <(626)%20381-8171>
https://urldefense.proofpoint.com/v2/url?u=http-3A__ggvy.cl&d=DwIGaQ&c=
imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_
7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-
6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=GH2YmJwH3j59FpvbwH0pJu3-
LJHbo4BTkG73yMtknFw&e=
Post by George Vega Yon
Post by George Vega Yon
Post by Daniel Fulop
Sounds like a good idea. Not sure if you’re reinventing the wheel or
not.
Post by George Vega Yon
Post by George Vega Yon
Post by Daniel Fulop
https://urldefense.proofpoint.com/v2/url?u=https-3A__github.
com_ropensci_onboarding&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6Y
HLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_
Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=Xaz1EafJxnCZMDhwVbMq39-
DSlGClnlW10wmp8307EA&e=
Post by George Vega Yon
Post by George Vega Yon
Post by Daniel Fulop
Date: December 12, 2017 at 4:13:59 PM
Subject: [R-sig-phylo] Will phyloXML in R be useful?
Hey,
Right now, I'm working on a wrapper for jsPhyloSVG (a javascript
library
Post by George Vega Yon
Post by George Vega Yon
Post by Daniel Fulop
for visualizing phylogenetic trees on the web browser) in R, and just
got
Post by George Vega Yon
Post by George Vega Yon
Post by Daniel Fulop
to learn about the phyloXML format. Googling around and checking out
this
Post by George Vega Yon
Post by George Vega Yon
Post by Daniel Fulop
email list archives it seems that there's no support for this format in R.
My question is: how useful do you think having this in R will be? I'm
willing to write an R package to read/write trees in this format (done
before with GEXF, which is for networks in general). But I just want to
make sure that (1) this will be useful for the community, and (2) I'm
not
Post by George Vega Yon
Post by George Vega Yon
Post by Daniel Fulop
reinventing the wheel (is anybody working on this now?). What are your
thoughts?
Best,
George G. Vega Yon
+1 (626) 381 8171 <(626)%20381-8171>
https://urldefense.proofpoint.com/v2/url?u=http-3A__ggvy.cl&
d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_
7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-
6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=GH2YmJwH3j59FpvbwH0pJu3-
LJHbo4BTkG73yMtknFw&e=
Post by George Vega Yon
Post by George Vega Yon
Post by Daniel Fulop
[[alternative HTML version deleted]]
_______________________________________________
https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.
ethz.ch_mailman_listinfo_r-2Dsig-2Dphylo&d=DwIGaQ&c=
imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_
7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-
6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=F6nfY69ENJtHqcPhA_
so8xyQlwQpn3HwI63r5ov4Xf8&e=
Post by George Vega Yon
Post by George Vega Yon
Post by Daniel Fulop
Searchable archive at https://urldefense.proofpoint.
com/v2/url?u=http-3A__www.mail-2Darchive.com_r-2D&d=DwIGaQ&c=
imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_
7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-
6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=ysaFlE8Zm70teQET_
RVPd9xB5EvNFPojxC-Pt7Ekpuk&e=
Post by George Vega Yon
[[alternative HTML version deleted]]
_______________________________________________
https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.
ethz.ch_mailman_listinfo_r-2Dsig-2Dphylo&d=DwIGaQ&c=
imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_
7iv2ZZTsTpqF6jBUoOs67dzNTy0W_Y&m=izAgipXSIMSu-
6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=F6nfY69ENJtHqcPhA_
so8xyQlwQpn3HwI63r5ov4Xf8&e=
Post by George Vega Yon
Searchable archive at https://urldefense.proofpoint.
com/v2/url?u=http-3A__www.mail-2Darchive.com_r-2Dsig-
2Dphylo-40r-2Dproject.org_&d=DwIGaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6Y
HLR0Sj_gZ4adc&r=eGWUXrFTNKFQ_7iv2ZZTsTpqF6jBUoOs67dzNTy0W_
Y&m=izAgipXSIMSu-6nAHEQLMuJAo1iol6odf6w4kB7xE4I&s=JBS4-
wowjXN2N2zGbTKrOkxo5314bZIjY40wPxcc9cY&e=
--
Hilmar Lapp -:- genome.duke.edu -:- lappland.io
[[alternative HTML version deleted]]

_______________________________________________
R-sig-phylo mailing list - R-sig-***@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-phylo
Searchable archive at http://www.mai

Loading...